General interests

Bioinformatics:

  • Abundance sequences classification
  • Metagenomics and viral metagenomics
  • Metagenome-wide association studies
  • Protein structure classification

Computer science:

  • Supervised and unsupervised classification

Projects

  • (Viral) metagenomics sequence annotations
  • Binning
  • Human gut MWAS
  • Gene calling for metagenomics
  • High throughput remote homology detection